Bibliografic database on Semiconductors, Heterostructures and Biophysics

2000 - 2008 years

• Role of Reversibility in Viral Capsid Growth: A Paradigm for Self-Assembly
  D. C. Rapaport
  Phys. Rev. Lett. 101, 186101 (2008)
• Quantitative Imaging of Single, Unstained Viruses with Coherent X Rays
  Changyong Song, Huaidong Jiang, Adrian Mancuso, Bagrat Amirbekian, Li Peng, Ren Sun, Sanket S. Shah, Z. Hong Zhou, Tetsuya Ishikawa, and Jianwei Miao
  Phys. Rev. Lett. 101, 158101 (2008)
• Radial Distribution of RNA Genomes Packaged inside Spherical Viruses
  Se Il Lee and Toan T. Nguyen
  Phys. Rev. Lett. 100, 198102 (2008)
• Hexagonal Order in Crystalline and Columnar Phases of Hard Rods
  Eric Grelet
  Phys. Rev. Lett. 100, 168301 (2008)
• Effects of Spatial Competition on the Diversity of a Quasispecies
  Jacobo Aguirre and Susanna C. Manrubia
  Phys. Rev. Lett. 100, 038106 (2008)
• Low Frequency Mechanical Modes of Viral Capsids: An Atomistic Approach
  Eric C. Dykeman and Otto F. Sankey
  Phys. Rev. Lett. 100, 028101 (2008)
• Elastic properties and mechanical stability of chiral and filled viral capsids
  Mathias Buenemann and Peter Lenz
  Phys. Rev. E 78, 051924 (2008)
• Nonspecific interactions in spontaneous assembly of empty versus functional single-stranded RNA viruses
  Antonio Šiber and Rudolf Podgornik
  Phys. Rev. E 78, 051915 (2008)
• Model of human immunodeficiency virus budding and self-assembly: Role of the cell membrane
  Rui Zhang and Toan T. Nguyen
  Phys. Rev. E 78, 051903 (2008)
• Elastic modulus of viral nanotubes
  Yue Zhao, Zhibin Ge, and Jiyu Fang
  Phys. Rev. E 78, 031914 (2008)
• Twenty-four near-instabilities of Caspar-Klug viruses
  François Englert, Kasper Peeters, and Anne Taormina
  Phys. Rev. E 78, 031908 (2008)
• Membrane lipid segregation in endocytosis
  Sarah A. Nowak and Tom Chou
  Phys. Rev. E 78, 021908 (2008)
• How rigid are viruses
  R. D. Hartschuh, S. P. Wargacki, H. Xiong, J. Neiswinger, A. Kisliuk, S. Sihn, V. Ward, R. A. Vaia, and A. P. Sokolov
  Phys. Rev. E 78, 021907 (2008)
• Two-state model for helicase translocation and unwinding of nucleic acids
  Ashok Garai, Debashish Chowdhury, and M. D. Betterton
  Phys. Rev. E 77, 061910 (2008)
• Tilable nature of virus capsids and the role of topological constraints in natural capsid design
  Ranjan V. Mannige and Charles L. Brooks
  Phys. Rev. E 77, 051902 (2008)
• Quantifying intermittent transport in cell cytoplasm
  Thibault Lagache and David Holcman
  Phys. Rev. E 77, 030901 (2008)
• Erratum: Acoustic phonon quantization and low-frequency Raman spectra of spherical viruses [Phys. Rev. E 73, 011901 (2006)]
  Mina Talati and Prafulla K. Jha
  Phys. Rev. E 77, 029904 (2008)
• Landau theory of crystallization and the capsid structures of small icosahedral viruses
  V. L. Lorman and S. B. Rochal
  Phys. Rev. B 77, 224109 (2008)
• Counterion-Induced Abnormal Slowdown of F-Actin Diffusion across the Isotropic-to-Nematic Phase Transition
  Jun He, Jorge Viamontes, and Jay X. Tang
  Phys. Rev. Lett. 99, 068103 (2007)
• Probing Persistence in DNA Curvature Properties with Atomic Force Microscopy
  J. Moukhtar, E. Fontaine, C. Faivre-Moskalenko, and A. Arneodo
  Phys. Rev. Lett. 98, 178101 (2007)
• Impact of Non-Poissonian Activity Patterns on Spreading Processes
  Alexei Vazquez, Balázs Rácz, András Lukács, and Albert-László Barabási
  Phys. Rev. Lett. 98, 158702 (2007)
• Cooperative action in eukaryotic gene regulation: Physical properties of a viral example
  Maria Werner, LiZhe Zhu, and Erik Aurell
  Phys. Rev. E 76, 061909 (2007)
• Role of electrostatic interactions in the assembly of empty spherical viral capsids
  Antonio Šiber and Rudolf Podgornik
  Phys. Rev. E 76, 061906 (2007)
• Soft modes near the buckling transition of icosahedral shells
  M. Widom, J. Lidmar, and David R. Nelson
  Phys. Rev. E 76, 031911 (2007)
• Dynamic and static light scattering analysis of DNA ejection from the phage λ
  David Löf, Karin Schillén, Bengt Jönsson, and Alex Evilevitch
  Phys. Rev. E 76, 011914 (2007)
• Raman intensity and spectra predictions for cylindrical viruses
  Eric C. Dykeman, Otto F. Sankey, and Kong-Thon Tsen
  Phys. Rev. E 76, 011906 (2007)
• Influence of charge and flexibility on smectic phase formation in filamentous virus suspensions
  Kirstin R. Purdy and Seth Fraden
  Phys. Rev. E 76, 011705 (2007)
• Kinetics of viral self-assembly: Role of the single-stranded RNA antenna
  Tao Hu and B. I. Shklovskii
  Phys. Rev. E 75, 051901 (2007)
• Simulation studies of a phenomenological model for elongated virus capsid formation
  Ting Chen and Sharon C. Glotzer
  Phys. Rev. E 75, 051504 (2007)
• Time scale of random sequential adsorption
  Radek Erban and S. Jonathan Chapman
  Phys. Rev. E 75, 041116 (2007)
• Self-organizing behavior in a lattice model for co-evolution of virus and immune systems
  N. Sh. Izmailian, Vl. V. Papoyan, V. B. Priezzhev, and Chin-Kun Hu
  Phys. Rev. E 75, 041104 (2007)
• Nonlinear finite-element analysis of nanoindentation of viral capsids
  Melissa M. Gibbons and William S. Klug
  Phys. Rev. E 75, 031901 (2007)
• Colloquium: Opportunities in nanomagnetism
  S. D. Bader
  Rev. Mod. Phys. 78, 1 (2006)
• Temperature Effects on Threshold Counterion Concentration to Induce Aggregation of fd Virus
  Qi Wen and Jay X. Tang
  Phys. Rev. Lett. 97, 048101 (2006)
• Chiral Nematic Phase of Suspensions of Rodlike Viruses : Left-Handed Phase Helicity from a Right-Handed Molecular Helix
  Fabio Tombolato, Alberta Ferrarini, and Eric Grelet
  Phys. Rev. Lett. 96, 258302 (2006)
• Continuum Theory of Retroviral Capsids
  T. T. Nguyen, R. F. Bruinsma, and W. M. Gelbart
  Phys. Rev. Lett. 96, 078102 (2006)
• Real-Time and Background-Free Detection of Nanoscale Particles
  Filipp V. Ignatovich and Lukas Novotny
  Phys. Rev. Lett. 96, 013901 (2006)
• Spreading dynamics on small-world networks with connectivity fluctuations and correlations
  Alexei Vazquez
  Phys. Rev. E 74, 056101 (2006)
• Irreversible growth model for virus capsid assembly
  Stephen D. Hicks and C. L. Henley
  Phys. Rev. E 74, 031912 (2006)
• Buckling transition in icosahedral shells subjected to volume conservation constraint and pressure: Relations to virus maturation
  Antonio Å iber
  Phys. Rev. E 73, 061915 (2006)
• Acoustic phonon quantization and low-frequency Raman spectra of spherical viruses
  Mina Talati and Prafulla K. Jha
  Phys. Rev. E 73, 011901 (2006)
• Nematic-isotropic spinodal decomposition kinetics of rodlike viruses
  M. Paul Lettinga, Kyongok Kang, Peter Holmqvist, Arnout Imhof, Didi Derks, and Jan K. G. Dhont
  Phys. Rev. E 73, 011412 (2006)
• Kayaking and Wagging of Rods in Shear Flow
  Yu-Guo Tao, W. K. den Otter, and W. J. Briels
  Phys. Rev. Lett. 95, 237802 (2005)
• Icosahedral Packing of RNA Viral Genomes
  J. Rudnick and R. Bruinsma
  Phys. Rev. Lett. 94, 038101 (2005)
• Mechanical properties of viral capsids
  Roya Zandi and David Reguera
  Phys. Rev. E 72, 021917 (2005)
• Electrostatics and the assembly of an RNA virus
  Paul van der Schoot and Robijn Bruinsma
  Phys. Rev. E 71, 061928 (2005)
• Selective advantage for conservative viruses
  Y. Brumer and E. I. Shakhnovich
  Phys. Rev. E 71, 031903 (2005)
• Properties of evolving e-mail networks
  J. Wang and P. De Wilde
  Phys. Rev. E 70, 066121 (2004)
• Isotropic-cholesteric phase transition of filamentous virus suspensions as a function of rod length and charge
  K. R. Purdy and S. Fraden
  Phys. Rev. E 70, 061703 (2004)
• Self-assembly of polyhedral shells: A molecular dynamics study
  D. C. Rapaport
  Phys. Rev. E 70, 051905 (2004)
• Microrheology of solutions of semiflexible biopolymer filaments using laser tweezers interferometry
  K. M. Addas, C. F. Schmidt, and J. X. Tang
  Phys. Rev. E 70, 021503 (2004)
• Host-parasite coevolution and optimal mutation rates for semiconservative quasispecies
  Y. Brumer and E. I. Shakhnovich
  Phys. Rev. E 69, 061909 (2004)
• Transmission of severe acute respiratory syndrome in dynamical small-world networks
  N. Masuda, N. Konno, and K. Aihara
  Phys. Rev. E 69, 031917 (2004)
• Approximate solution to the speed of spreading viruses
  V. Ortega-Cejas, J. Fort, V. Méndez, and D. Campos
  Phys. Rev. E 69, 031909 (2004)
• Elastic deformation of a fluid membrane upon colloid binding
  M. Deserno
  Phys. Rev. E 69, 031903 (2004)
• Oscillatory epidemic prevalence in growing scale-free networks
  Y. Hayashi, M. Minoura, and J. Matsukubo
  Phys. Rev. E 69, 016112 (2004)
• Viral Self-Assembly as a Thermodynamic Process
  R. F. Bruinsma, W. M. Gelbart, D. Reguera, J. Rudnick, and R. Zandi
  Phys. Rev. Lett. 90, 248101 (2003)
• Elastic Response of Single DNA Molecules Exhibits a Reentrant Collapsing Transition
  Yoshihiro Murayama, Yoshihiko Sakamaki, and Masaki Sano
  Phys. Rev. Lett. 90, 018102 (2003)
• Virus shapes and buckling transitions in spherical shells
  J. Lidmar, L. Mirny, and D. R. Nelson
  Phys. Rev. E 68, 051910 (2003)
• Electronic structures of Ascaris trypsin inhibitor in solution
  H. Zheng
  Phys. Rev. E 68, 051908 (2003)
• Information flow dynamics and timing patterns in the arrival of email viruses
  L. S. Liebovitch and I. B. Schwartz
  Phys. Rev. E 68, 017101 (2003)
• Diffusion coefficients of two-dimensional viral DNA walks
  Tai-Hsin Hsu and Su-Long Nyeo
  Phys. Rev. E 67, 051911 (2003)
• Diffusion coefficients of two-dimensional viral DNA walks
  T.-H. Hsu and S.-L. Nyeo
  Phys. Rev. E 67, 051911 (2003)
• Time-Delayed Spread of Viruses in Growing Plaques
  J. Fort and V. Méndez
  Phys. Rev. Lett. 89, 178101 (2002)
• Epidemic Threshold in Structured Scale-Free Networks
  V. M. Eguíluz and K. Klemm
  Phys. Rev. Lett. 89, 108701 (2002)
• Scale-free topology of e-mail networks
  H. Ebel, L.-I. Mielsch, and S. Bornholdt
  Phys. Rev. E 66, 035103 (2002)
• Email networks and the spread of computer viruses
  M. E. J. Newman, S. Forrest, and J. Balthrop
  Phys. Rev. E 66, 035101 (2002)
• Halting viruses in scale-free networks
  Z. Dezso and A.-L. Barabási
  Phys. Rev. E 65, 055103 (2002)
• Epidemic Spreading in Scale-Free Networks
  R. Pastor-Satorras and A. Vespignani
  Phys. Rev. Lett. 86, 3200 (2001)
• Long-Range Correlations in Genomic DNA: A Signature of the Nucleosomal Structure
  B. Audit, C. Thermes, C. Vaillant, Y. d'Aubenton-Carafa, J. F. Muzy, and A. Arneodo
  Phys. Rev. Lett. 86, 2471 (2001)
• Field theory for a reaction-diffusion model of quasispecies dynamics
  Romualdo Pastor-Satorras and Ricard V. Solé
  Phys. Rev. E 64, 051909 (2001)
• Field theory for a reaction-diffusion model of quasispecies dynamics
  R. Pastor-Satorras and R. V. Solé
  Phys. Rev. E 64, 051909 (2001)