Secondary Structure
- Radial Distribution of RNA Genomes Packaged inside Spherical Viruses
Se Il Lee and Toan T. Nguyen
Phys. Rev. Lett. 100, 198102 (2008)
- Force-induced misfolding in RNA
M. Manosas, I. Junier, and F. Ritort
Phys. Rev. E 78, 061925 (2008)
- Systematic Field Theory of the RNA Glass Transition
Francois David and Kay Jörg Wiese
Phys. Rev. Lett. 98, 128102 (2007)
- Freezing transition of the random bond RNA model: Statistical properties of the pairing weights
Cécile Monthus and Thomas Garel
Phys. Rev. E 75, 031103 (2007)
- RNA secondary structure design
Bernd Burghardt and Alexander K. Hartmann
Phys. Rev. E 75, 021920 (2007)
- Freezing of Random RNA
Michael Lässig and Kay Jörg Wiese
Phys. Rev. Lett. 96, 228101 (2006)
- Model for Folding and Aggregation in RNA Secondary Structures
Vishwesha Guttal and Ralf Bundschuh
Phys. Rev. Lett. 96, 018105 (2006)
- Quantification of the differences between quenched and annealed averaging for RNA secondary structures
Tsunglin Liu and Ralf Bundschuh
Phys. Rev. E 72, 061905 (2005)
- Dependence of RNA secondary structure on the energy model
Bernd Burghardt and Alexander K. Hartmann
Phys. Rev. E 71, 021913 (2005)
- Unfolding single RNA molecules by mechanical force: A stochastic kinetic method
Fei Liu and Zhong-can Ou-Yang
Phys. Rev. E 70, 040901 (2004)
- Analytical description of finite size effects for RNA secondary structures
Tsunglin Liu and Ralf Bundschuh
Phys. Rev. E 69, 061912 (2004)
- RNA Denaturation: Excluded Volume, Pseudoknots, and Transition Scenarios
M. Baiesi, E. Orlandini, and A. L. Stella
Phys. Rev. Lett. 91, 198102 (2003)
- Statistical mechanics of RNA folding: A lattice approach
P. Leoni and C. Vanderzande
Phys. Rev. E 68, 051904 (2003)
- Statistical mechanics of RNA folding: Importance of alphabet size
Ranjan Mukhopadhyay, Eldon Emberly, Chao Tang, and Ned S. Wingreen
Phys. Rev. E 68, 041904 (2003)
- Statistical physics of RNA folding
M. Müller
Phys. Rev. E 67, 021914 (2003)
- Zero-temperature properties of RNA secondary structures
Enzo Marinari, Andrea Pagnani, and Federico Ricci-Tersenghi
Phys. Rev. E 65, 041919 (2002)
- Statistical mechanics of secondary structures formed by random RNA sequences
R. Bundschuh and T. Hwa
Phys. Rev. E 65, 031903 (2002)
- Hairpin Formation and Elongation of Biomolecules
Andrea Montanari and Marc Mézard
Phys. Rev. Lett. 86, 2178 (2001)
- Comment on
A. K. Hartmann
Phys. Rev. Lett. 86, 1382 (2001)
- Glassy Transition in a Disordered Model for the RNA Secondary Structure
A. Pagnani, G. Parisi, and F. Ricci-Tersenghi
Phys. Rev. Lett. 84, 2026 (2000)
- RNA Secondary Structure Formation: A Solvable Model of Heteropolymer Folding
R. Bundschuh and T. Hwa
Phys. Rev. Lett. 83, 1479 (1999)
- Overlaps between RNA Secondary Structures
Paul G. Higgs
Phys. Rev. Lett. 76, 704 (1996)
- Folding RNA with the minimal loss of entropy
Ariel Fernández, Hugo Arias, and Diego Guerín
Phys. Rev. E 52, R1299 (1995)
- RNA folding and combinatory landscapes
Walter Fontana, Peter F. Stadler, Erich G. Bornberg-Bauer, Thomas Griesmacher, Ivo L. Hofacker, Manfred Tacker, Pedro Tarazona, Edward D. Weinberger, and Peter Schuster
Phys. Rev. E 47, 2083 (1993)
- Localization of strain in the RNA backbone and its functional implication
Ariel Fernández and Herschel Rabitz
Phys. Rev. Lett. 69, 546 (1992)
- Glassy kinetic barriers between conformational substates in RNA
Ariel Fernández
Phys. Rev. Lett. 64, 2328 (1990)
- Activation-energy landscape for metastable RNA folding
Ariel Fernández and Eugene I. Shakhnovich
Phys. Rev. A 42, 3657 (1990)